Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917749.1_cds_XP_016467267.1_60027
CDS Infomation

[gene=LOC107789900] [db_xref=GeneID:107789900] [protein=uncharacterized protein LOC107789900] [protein_id=XP_016467267.1] [location=join(15063..16680,16777..16854,17680..17777,18030..18193,18317..18774,19126..19589,19665..19892)] [gbkey=CDS]
Sequence

ATGGCACAGCGAGAGATAGGTATGGATCCGGGAGAAGGTACCAGTCGTTCCCCACCGGGT
CAGAGGGATAGATTTCCCTTAGAGGCTCACAGTGAGTCTCCAGTACCCCTAGTTTCAGCT
TCCCCAGCACTTGTTGGAGCCCAGGGAGATGCAGTACCCCCAGCCTCACCAGTTCCATTG
GTACCTGAGGCAGCTAGAGACACAGGACCTCCAGCACCTATTGTTCCCCCATCAGAGACT
GGGGAGCAGGGGATGAGGGAGGCTGTTCAGTTGCTGACTAGGATGGTTTCTATTCATGAG
CGACAGCTAGAGTCAGGAGCAGATGCCCGGAGAGATCGGATAGGAAGCTCGACGGTACGA
GAGTTTCTTCACTTGGCCCCTCCATTATTTACAGGATCCAGTTCCACTGAGGATCCCCAG
GACTTTATAGACCATATGTATAGAGTATTGAGGGTGATGCATGCCTCCGTCACCGAGGCT
GTGGAGTTGGCTTCTTTTCGACTACGTGATGTAGCCGTCCTATGGTATGAGGCATGGGAG
AGATCTAGAGGACCTGATGCTCCGCCAGCAGAGTGGGAGGACTTCTCTGAGGCTTTTTTA
GCCCATTATTTGCCACGGGAGGTTCGGGAGGCCCGTCTTGACCAGTTTCTTAGCCTAAAG
CAGGGGGATATGAGTGTGAGGGATTATAGCCATAAGTTTAATTCTTTGGCAAGGTATGCA
CCAGATATAGTACGTACCATGAGGGCTAGAGTTCATCATTATGTGGATGGTTTGGGGGAT
CATCTGATTAGAGACTGTAGGGTTGCATCCCTATCGGATGATGTAGATATTTCCCGCATA
CAGGCTTTCGCTCAGACTACAGAGGACCTTTCCCGTCGGATTCGTGATACTCGCAGGGAT
AGGGAGCAGAGTAAGAGGGCTCGTACTATGGGGTCTTATAGGGAGCCACGAGTTGATTTT
AGGCCCCCACTCCATCGATATCCACCTCGGTCAGCAGGTAGTTTCCCACCACAGATGCAG
GGCCAGCGGTTTGATCGTTATATTCAGTCAGGACCGGGGCAGAGCTCAGGCCAGCCTGAG
GGCCGTCGACAGGAGCGTTCTGCACAGATGAGACAGCTTACTCCTCCATGTACTCAGTGC
GGTAAGCTGCACACCGGGCAATGTAGACAGGGTTCGAGTGCATGTTTTCATTGTGGGCAG
ACAGGACATTATATTAGCCGGTGCCCGGGGTTAGGCAGAGGTACACCAGCTCAGCCTTCA
GGATTCACAGCAGCCTCTTCGCCCTCAGTCCGTGCTCCCCGACCAGGTCCACAGTCTACT
CAGGGCCGTGGTAGGGGGAGAGGTGGAGGAGACACCTCAGGTTCTAGTGGTGGCCAGAAC
CGCTTTTATGCACTCACAGGCCGACAGGATTCAGAGGCATCCCCAGATGTTGTCACAGGT
ATATTGACAATACATTCTCATGCCATTTATGCATTGATGGATCCCGGCTCTACATTTTCA
TATATTACTCCATTTATTGCTGGTAAGCTTGACATGAGATCTGAGTTGTTGCCACAGCCA
GTTGAGGTGTCTACGCCAGTTGGCGACTCTATTGTAGCTAATCATGTCTATCGAGATTCT
TGTTATGCTAATATTGATTGTCGTGCAAAGTTGGTCCGATTTCATTTTCCTGGTGAGCCT
GTCCTTGAATGGAAAGCTTTTCTTGGTCATGTTATTACCGGCGATGGTATCAAGGTTGAT
GGCCAAAAGATTGAAGCTGTGATGACTTGGCCGAGGCCCTTGAATCCGACAGAGCATGGT
AAGGTTATCGCGTACGCCTCCAGACAGTTGCGAAAACATGAACAGAACTATCCTACGCAT
GATCTTGAGTTAGCCGCAGTTGTATTTGCCCTAAAGATTTGGCGGCATTATCTATATGGG
GTTCATATTGATGTTTTCACCGACCACCAGAGCCTTCACCGGAAGTCCATGGGCAGTCTA
AGCCATGTTGAAGCTGATAAGGTCAAGATGACCAAATATCTATGCCAGCTAGCTAGTTTG
CAGGTGCGTTTGGTAGATGCAGAGGGTGGACGCATTCTCGTTCAGAATACGGCAAAATCT
TCTTTTGTTACTGAAGTGAAAGAGCGACAACACGAGGATCCTGAGCTTATAAAACTGAGG
GAAAGTATTCCACAGCAGCGACAACCTTTATTTGAGCTAACTGGAGATGGAGTCCTTAGA
TACCAGGGCCGCTTATGTGTACCGTCAGTAGGAGAGCTCCGTGCCAAGATTCTTTCGGAG
GCCCATTATTCTAGATATGCAGTTCATCCCGGAGCGACAAAGATGTATCGGGACCTTCGA
CAGATCTATTGGTGGAATGGAATGAAAAAAGATATCGCGGAGATGGTAGCCCAATGTCCC
AACTGCCAGCAAGTTAAAACTGATGGACAGGCAGAGCGTACTATTCAGACAGTTGAGGAT
ATGTTACGTGCCTGCGTGCTAGATTTTAAAGGAAGTTGGGATGATCATCTACCTCTTATT
GAGTTCGCTTATAATAACAGCTTCCAAGCTAGTATTCAGATGGCTCCTTACGAAGCACTA
TACGGGCGGAAGTGTAGGTCGCCGATCGGTTGGTTCGAGGTCGGGGAAGCAGAGTTGCTA
GGTCCTAACTTAGTCCAGCAAGCAATGGAAAAGGTAAAACTTATTAGAGACCGGCTGCGT
ACAGCACAAAGTCGGCAAAAGTCTTATGCAGATGTTCGACGACGAGACTTAGAGTTTGAT
GTAGAAGATTGGGTTTTCCTGAAAGTATCGCCTATGAAGGGCGTCATGCGATTTGGAAAG
AAGGGGAAGCTCAGCCCCAGGTATGTTGGACCGTATAAGATTATTCGGAGGATTGGTAGG
TGCATTGGAGATCCTTCACGTATTACGCCCATTGAGGATATTCACATTGCTGAAGACTTA
TCTTATGCAGAGGTACCAGTAGTTATTTTAGATCGGCAGGTAAGGAAGCTTCGAACTAAA
GAAGTGGCTTCCGTGAAAGTGTTATGGCGAAATAACAACATCGAGGAAATGACCTGGGAA
GCTGAGGAGGAAATGAGGAAGAAGTACCCCCACCTATTTACGACTTAA

Peptide Sequence

PEP ID

XP_016467267.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107789900 [Nicotiana tabacum]
Sequence

MAQREIGMDPGEGTSRSPPGQRDRFPLEAHSESPVPLVSASPALVGAQGDAVPPASPVPL
VPEAARDTGPPAPIVPPSETGEQGMREAVQLLTRMVSIHERQLESGADARRDRIGSSTVR
EFLHLAPPLFTGSSSTEDPQDFIDHMYRVLRVMHASVTEAVELASFRLRDVAVLWYEAWE
RSRGPDAPPAEWEDFSEAFLAHYLPREVREARLDQFLSLKQGDMSVRDYSHKFNSLARYA
PDIVRTMRARVHHYVDGLGDHLIRDCRVASLSDDVDISRIQAFAQTTEDLSRRIRDTRRD
REQSKRARTMGSYREPRVDFRPPLHRYPPRSAGSFPPQMQGQRFDRYIQSGPGQSSGQPE
GRRQERSAQMRQLTPPCTQCGKLHTGQCRQGSSACFHCGQTGHYISRCPGLGRGTPAQPS
GFTAASSPSVRAPRPGPQSTQGRGRGRGGGDTSGSSGGQNRFYALTGRQDSEASPDVVTG
ILTIHSHAIYALMDPGSTFSYITPFIAGKLDMRSELLPQPVEVSTPVGDSIVANHVYRDS
CYANIDCRAKLVRFHFPGEPVLEWKAFLGHVITGDGIKVDGQKIEAVMTWPRPLNPTEHG
KVIAYASRQLRKHEQNYPTHDLELAAVVFALKIWRHYLYGVHIDVFTDHQSLHRKSMGSL
SHVEADKVKMTKYLCQLASLQVRLVDAEGGRILVQNTAKSSFVTEVKERQHEDPELIKLR
ESIPQQRQPLFELTGDGVLRYQGRLCVPSVGELRAKILSEAHYSRYAVHPGATKMYRDLR
QIYWWNGMKKDIAEMVAQCPNCQQVKTDGQAERTIQTVEDMLRACVLDFKGSWDDHLPLI
EFAYNNSFQASIQMAPYEALYGRKCRSPIGWFEVGEAELLGPNLVQQAMEKVKLIRDRLR
TAQSRQKSYADVRRRDLEFDVEDWVFLKVSPMKGVMRFGKKGKLSPRYVGPYKIIRRIGR
CIGDPSRITPIEDIHIAEDLSYAEVPVVILDRQVRKLRTKEVASVKVLWRNNNIEEMTWE
AEEEMRKKYPHLFTT

Transcript Sequence

Gene sequence data has not been registered.